Publications

SOUMISES

  • Releasing trapped Taylor bubbles via centrifugation and inclination
    MARCOTTE Alice,  LEDDA Pier Guiseppe, BURIASCO Valentin, DENE Paul, GALLAIRE François, KEISER Ludovic
    arXiv 
     

  • Kinetics of zoospores approaching a root using a microfluidic device
    COHEN Céline, GAUCI François-Xavier, NOBLIN Xavier, ATTARD Agnès, THOMEN Philippe
    bioRXiv 

     

2023

  • Automated high-content image-based characterization of microorganism behavioral diversity and distribution
    LUPATELLI Carlotta, ATTARD Agnès, KUHN Marie-Line, COHEN Céline, THOMEN Philippe, NOBLIN Xavier, GALIANA Eric. 
    Computational and Structural Biotechnology Journal, https://www.sciencedirect.com/science/article/pii/S2001037023004117?via%3Dihub 

  • Biological fractionation of lithium isotopes by cellular Na+/H+ exchangers unravels fundamental transport mechanisms
    POET Mallorie, VIGIER Nathalie, BOURET Yann, JARRETOU Gisèle, GAUTIER Romain, BENDAHHOU Saïd, BALTER Vincent, MONTANES Maryline, THIBON Fanny, COUNILLON Laurent. 
    iScience, 26, 106887, doi.org/10.1016/j.isci.2023.106887 

2022

  • How does our knowledge on the Na+/H+ exchanger NHE1 obtained by biochemical and molecular analyses keep up with its recent structure determination

    POET Mallorie, DOYEN Denis, VAN OBBERGHEN Emmanuel, JARRETOU Gisèle, BOURET Yann, COUNILLON Laurent

    Frontiers in Physiology 15;13:907587, doi: 10.3389/fphys.2022.907587

  • Intracellular pH control by membrane transport in mammalian cells. Insights into the elective advantages of functional redundancy

    DOYEN Denis, POET Mallorie, JARRETOU Gisèle, PISANI Didier F., TAUC Michel, COUGNON Marc, ARGENTINA Mederic, BOURET Yann, COUNILLON Laurent

    Frontiers Molecular Biosciences 18;9:825028, doi: 10.3389/fmolb.2022.825028

  • Mechanical impact on a breath figure

    BETTI Lorenzo, COHEN Céline, NOBLIN Xavier

    Phys. Rev. Fluids https://journals.aps.org/prfluids/abstract/10.1103/PhysRevFluids.8.013601

  • Coordination of two opposite flagella allows high-speed swimming and active turning of individual zoospores

    Quang D. Tran, Eric Galiana, Philippe Thomen, Céline Cohen, François Orange, Fernando Peruani, Xavier Noblin

    eLife https://elifesciences.org/articles/71227. 

  • Cross-linked polymer microparticles with tunable surface properties by the combination of suspension free radical copolymerization and Click chemistry

    MORATILLE Yoanh, ARSHAD Muhammad, COHEN Celine, MAALI Abdelhamid, LEMAIRE Elisabeth, SINTES-ZYDOWICZ Nathalie, DROCKENMULLER Eric

    Journal of Colloid and Interface Science 607(2) 1687-1698, 10.1016/j.jcis.2021.09.012

2021

  • Simulations of amperometric monitoring of exocytosis: moderate pH variations within the cell-electrode cleft with the buffer diffusion
    BOURET Yann, GUILLE-COLLIGNON Manon, LEMAÎTRE Frédéric
    Analytical and Bioanalytical Chemistry, 10.1007/s00216-021-03443-z
     
  • Four species of bacteria deterministically assemble to form a stable biofilm in a millifluidic channel stable biofilm in a millifluidic channel
    A. Monmeyran, W. Benyoussef, P. Thomen, N. Dahmane, A. Baliarda, M. Jules, S. Aymerich and N. Henry
    Biofilms and Microbiomes, 7(64) 10.1038/s41522-021-00233-4

2020

  • Phytophthora zoospores: From perception of environmental signals to inoculum formation on the host-root surface

    BASSANI Ilaria, LAROUSSE Marie, TRAN Quang, ATTARD Agnès, GALIANA Eric

    Computational and Structural Biotechnology Journal, 18 3766-3773, 10.1016/j.csbj.2020.10.045
     

  • Transcriptomic and Ultrastructural Signatures of K+-Induced Aggregation in Phytophthora parasitica Zoospores

    BASSANI Ilaria, RANCUREL Corinne, PAGNOTTA Sophie, ORANGE François, PONS Nicolas, LEBRIGAND Kevin, PANABIÈRES Franck, COUNILLON Laurent, NOBLIN Xavier, GALIANA Eric

    Microorganisms, 8(7) 1012, 10.3390/microorganisms8071012
     

  • Cavitation Mean Expectation Time in a Stretched Lennard-Jones Fluid under Confinement

    PELLEGRIN Mathieu, BOURET Yann, CELESTINI Franck, NOBLIN Xavier

    Langmuir 36(47) 14181-14188, 10.1021/acs.langmuir.0c01886
     

  • Spatiotemporal pattern formation in E. coli biofilms explained by a simple physical energy balance

    Philippe Thomen, Jules D. P. Valentin, Anne-Florence Bitbol and Nelly Henry

    Soft Matter 16 494-504, 10.1039/c9sm01375j
     

  • Mechanical force-induced morphology changes in a human fungal pathogen

    PUERNER Charles, KUKHALEISHVILI Nino, THOMSON Darren, SCHAUB Sebastien, NOBLIN Xavier, SEMINARA Agnese, BASSILANA Martine, ARKOWITZ Robert

    BMC Biology 18(1) 122, 10.1186/s12915-020-00833-0

2019

  • Hybrid surfaces combining electropolymerization and lithography: fabrication and wetting properties

    COHEN Céline, DARMANIN Thierry, PRIAM Jordan, GUITTARD Frédéric, NOBLIN Xavier

    Soft Matter 15(45) 9352-9358, 10.1039/c9sm01402k
     

  • Capillary bridge technique to study superhydrophobic surfaces

    COHEN Céline, BOURET Yann, IZMAYLOV Yaroslava, SAUDER Grégory, FORESTIER Emilie, NOBLIN Xavier

    Soft Matter 15(14) 2990-2998, 10.1039/c8sm02458h
     

  • Guidance of zoospores by potassium gradient sensing mediates aggregation

    GALIANA Eric, COHEN Céline, THOMEN Philippe, ETIENNE Catherine, NOBLIN Xavier

    Interface 16(157) 20190367, 10.1098/rsif.2019.0367

2018

  • The detailed acoustic signature of a micro-confined cavitation bubble

    SCOGNAMIGLIO Chiara, MAGALETTI Francesco, IZMAYLOV Yaroslava, GALLO Mirko, CASCIOLA Carlo Massimo, NOBLIN Xavier

    Soft Matter 14(39) 7987-7995, 10.1039/c8sm00837j
     

  • Study of the thrust–drag balance with a swimming robotic fish

    GIBOUIN Florence, RAUFASTE Christophe, BOURET Yann, ARGENTINA Médéric

    Physics of Fluids 30(9) 10.1063/1.5043137
     

  • The inducible chemical-genetic fluorescent marker FAST outperforms classical fluorescent proteins in the quantitative reporting of bacterial biofilm dynamics

    Amaury Monmeyran, Philippe Thomen, Hugo Jonquière, Franck Sureau, Chenge Li, Marie-Aude Plamont, Carine Douarche, Jean-François Casella, Arnaud Gautier & Nelly Henry

    Scientic Reports 8, 10.1038/s41598-018-28643-z

  • Reconstructing the functional connectivity of multiple spike trains using Hawkes models

    LAMBERT Régis C., TULEAU-MALOT Christine, BESSAIH Thomas, RIVOIRARD Vincent, BOURET Yann, LERESCHE Nathalie, REUYNAUD-BOURET Patricia

    Journal of Neuroscience Methods 1;297:9-21, doi.org/10.1016/j.jneumeth.2017.12.026

2016

  • Na(+)/H(+) antiporter (NHE1) and lactate/H(+) symporters (MCTs) in pH homeostasis and cancer metabolism

    COUNILLON Laurent, BOURET Yann, MARCHIQ Ibtissam, POUYSSEGUR Jacques  

    Biochimica et Biophysica Acta. 1863 2465-2480, doi.org/10.1016
     

  • Surrogate data methods based on a shuffling of the trials for synchrony detection: the centering issue

    ALBERT Mélisande, BOURET Yann, FROMONT Magalie, REYNAUD-BOURET Patricia

    Neural Computation 28(1) 2352-2392, 10.1162/NECO_a_00839
     

  • Physics of rapid movements in plants

    FORTERRE Yoel, MARMOTTANT Philippe, QUILLIET Catherine, NOBLIN Xavier

    Europhysics News 47 27-30, 10.1051/epn/2016104
     

  • Solitary-like waves in a liquid foam microchannel

    BOURET Yann, COHEN Alexandre, FRAYSSE Nathalie, ARGENTINA Médéric, RAUFASTE Christophe

    Physical Review Fluids 1 43902, 10.1103/PhysRevFluids.1.043902
     

  • Bubble dynamics inside an outgassing hydrogel confined in a Hele-Shaw cell

    HAUDIN Florence, NOBLIN Xavier, BOURET Yann, ARGENTINA Médéric, RAUFASTE Christophe

    Physical Review E 94 23109, 10.1103/PhysRevE.94.023109
     

  • The fern cavitation catapult: mechanism and design principles

    LLORENS C., ARGENTINA M., ROJAS N., WESTBROOK J., DUMAIS J., NOBLIN X.

    Interface 13(114) 7987-7995, 10.1098/rsif.2015.0930
     

  • Reactive Leidenfrost droplets

    RAUFASTE Christophe, BOURET Yann, CELESTINI Franck

    EPL - Europhysics Letters 114 46005, 10.1209/0295-5075/114/46005
     

  • Microfluidic separation of magnetic nanoparticles on an ordered array of magnetized micro-pillars

    ORLANDI G, KUZHIR P, IZMAYLOV Y, ALVES MARINS J, EZZAIER H, ROBERT Laurent, DOUTRE F, NOBLIN Xavier, LOMENECH C, BOSSIS Georges, MEUNIER A, SANDOZ G, ZUBAREV A

    Physical Review E 93(6) 62604, 10.1103/PhysRevE.93.062604